ADASTRA v6.1.0
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rs246976
chr5:68710716
T
>
C
Sequence
gagagaccagctgtcacctctgct[T/C]tctgttactctgtgactcagggta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
GM01310 ( Transformed lymphovlasoid cell line )
ASB for transcription factors
IKZF2_HUMAN
IKZF1_HUMAN
AHR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
-0.83
1.78
1.00
0.02
1.00
n/a
n/a
IKZF1_HUMAN
0.97
2.28
1.00
0.02
1.33
n/a
n/a
AHR_HUMAN
-2.45
2.39
1.00
0.02
1.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)