rs247856 chr16:84508809 T>G
- Sequence
ttgcggttgccagtgctggagcgt[T/G]aggaatgaggagtgactgctaata
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RUNX3_HUMAN MEF2B_HUMAN IKZF2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | n/a | 3.58 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -2.19 | 2.52 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.84 | 2.18 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -2.41 | 2.37 | 1.25 | n/a | n/a | |||
| COT1_HUMAN | n/a | 2.59 | 1.00 | n/a | No Hit |
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