rs2487680 chr1:3460878 T>C

Sequence
gaggctcagccgcacgtgccttcc[T/C]gggatggttttagcagagaatttg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
SMAD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMAD4_HUMAN 2.24 -4.08 0.021.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  fasting insulin,  homa-b,  homa-ir,  parkinsons disease,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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