rs248793 chr5:6633666 C>G

Sequence
cgtgggctgcgcggtcttcgcgcg[C/G]aatcgtcagacgaactcagtgtac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KMT2A_HUMAN NCOR1_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2A_HUMAN 1.57 -0.31 0.021.00 1.00 n/a No Hit
NCOR1_HUMAN 2.42 -0.22 0.031.00 1.00 n/a n/a
BRD4_HUMAN 1.39 0.06 0.031.00 1.44 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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