ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs249851
chr12:98471193
G
>
A
Sequence
tcattatagctccaaggccagcac[G/A]gtccctaatcagaactcactgaac
ASB in cell types
VCaP (prostate carcinoma)
tibial nerve
ASB for transcription factors
ANDR_HUMAN
EP300_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.10
1.21
1.00
5.4·10
-3
1.66
n/a
No Hit
EP300_HUMAN
0.59
2.06
1.00
7.8·10
-3
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
hip bone mineral density (bmd)
,
refractive error
,
rheumatoid arthritis
GTEx eQTL
Brain_Nucleus_accumbens_basal_ganglia
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Ovary
,
Pancreas
,
Pituitary
,
Testis
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)