rs2507 chr15:73983335 A>G
- Sequence
cccagctcgccaggcatgcaggac[A/G]gagctggcagatgagtcagaaatc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZBT20_HUMAN ZN600_HUMAN TZAP_HUMAN ZN660_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT20_HUMAN | -2.46 | 2.74 | 1.00 | n/a | No Hit | |||
| ZN600_HUMAN | -2.62 | 2.93 | 1.00 | n/a | n/a | |||
| TZAP_HUMAN | -2.94 | 3.10 | 1.00 | n/a | No Hit | |||
| ZN660_HUMAN | -3.01 | 2.89 | 1.00 | n/a | No Hit | |||
| GLIS1_HUMAN | -2.45 | 2.48 | 1.33 | n/a | No Hit |
Items per page:
1 – 5 of 8
Motif analysis
Genetic associations
GRASP coronary artery disease (cad), glaucoma, hdl cholesterol, height, late onset alzheimers disease
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood