rs251023 chr5:141513843 A>G
- Sequence
gctgcagccagagaagctgcagaa[A/G]aacacggagctgggggtgaagggg
- ASB in cell types
- HKC8 (kidney proximal tubule cell line) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN EPAS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.96 | n/a | 2.00 | 1.32 | Weak Discordant | |||
| EPAS1_HUMAN | -0.23 | 2.05 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Thyroid