rs251837 chr16:22681003 C>T
- Sequence
aaaatggagagaataataaatacc[C/T]gtctcacagggttgttattagatc
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM18526 (B – cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RBM25_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.57 | 2.24 | 1.42 | n/a | No Hit | |||
| STAG1_HUMAN | -2.92 | 4.02 | 2.29 | n/a | n/a | |||
| RBM25_HUMAN | -0.67 | 2.91 | 2.00 | n/a | n/a |
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