ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs25271
chr22:23537630
A
>
T
Sequence
agcaggggttttctctggggaccc[A/T]gagagaaggaggcgttttcaccac
ASB in cell types
J-Lat A72
ASB for transcription factors
SMCA4_HUMAN
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN
2.14
-1.20
4.0·10
-5
1.00
1.00
n/a
n/a
BRD4_HUMAN
1.47
0.40
9.0·10
-3
1.00
1.50
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
birth weight
,
hdl cholesterol
GTEx eQTL
Colon_Sigmoid
,
Liver
,
Nerve_Tibial
,
Ovary
,
Testis
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)