ADASTRA v6.1.0
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rs258013
chr5:116497833
C
>
A
Sequence
acaaaaaaaatgatctccatcgcc[C/A]tctctcttttgaaaatatatttcc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
GM12892 (female B-cells lymphoblastoid cell line)
epithelial cell of prostate
MS-1 (Small cell lung carcinoma)
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(+2 others)
ASB for transcription factors
CTCF_HUMAN
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.87
0.02
6.9·10
-17
1.00
1.30
n/a
No Hit
STAG1_HUMAN
2.50
-0.77
3.2·10
-7
1.00
1.08
n/a
n/a
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Motif analysis
No data available
Genetic associations
No data available
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)