rs258874 chr5:173618958 A>G

Sequence
atccatgaccttccctctgcaatc[A/G]aagtaaatgatgagggataaaagg
ASB in cell types
K562 (myelogenous leukemia) neutrophils from periferal blood pancreas

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) -0.10 0.73 1.001.8·10-3 1.99
neutrophils from periferal blood 0.29 2.50 1.000.01 1.50
pancreas -0.81 1.01 1.000.05 1.11
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Colon_Sigmoid Lung Nerve_Tibial Testis Thyroid

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