rs259051 chr5:80407724 A>G

Sequence
ggctcagcaaagggctaaggctgg[A/G]gccggggaagctgcctctaggtta
ASB in cell types
22RV1 (prostate carcinoma) monocytes from periferal blood
ASB for transcription factors
ANDR_HUMAN SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.48 1.008.1·10-4 2.00 n/a No Hit
SRBP2_HUMAN n/a 2.18 1.009.1·10-3 3.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  parkinsons disease,  total cholesterol
GTEx eQTL Adrenal_Gland,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid,  Whole_Blood

Download