ADASTRA v6.1.0
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rs26302
chr12:27969169
C
>
G
Sequence
gaaacgctccctcttatggaaaca[C/G]acataaagtctctctcttgcctgt
ASB in cell types
foreskin keratinocyte
glioblastoma cells
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
1.03
0.04
0.04
1.00
1.67
glioblastoma cells
2.22
-0.22
0.04
1.00
1.33
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
fasting insulin
,
height
,
homa-b
,
homa-ir
,
ldl cholesterol
,
refractive error
,
total cholesterol
GTEx eQTL
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
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