rs263315 chr2:157182713 A>G

Sequence
ttgactttcagactgtttctactt[A/G]gtgcctttgctctcactaccttat
ASB in cell types
K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.58 -1.59 0.031.00 2.00 1.43 Weak Discordant
TF65_HUMAN -1.78 2.24 1.000.04 1.00 n/a No Hit
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP amyotrophic lateral sclerosis (als) age of onset college completion eye color rheumatoid arthritis

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