rs268120 chr2:65377780 A>G
- Sequence
tccctaggtaactgtcaaagcggc[A/G]gtcctcagcagagaccaaagagga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 0.76 | 0.25 | 1.28 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 1.23 | 0.26 | 1.11 | |||
| MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) | -0.47 | 1.63 | 2.00 |
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