rs2683279 chr8:19271375 A>G
- Sequence
cccttctcttgcaacatcatgttt[A/G]ttcaaggttgctcattcctgttca
- ASB in cell types
- HepG2 (hepatoblastoma) foreskin keratinocyte GM19240 (B cells Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN CEBPG_HUMAN TEAD3_HUMAN CEBPA_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.60 | 0.45 | 1.41 | n/a | No Hit | |||
| CEBPG_HUMAN | -2.86 | 1.92 | 1.50 | n/a | No Hit | |||
| TEAD3_HUMAN | -1.72 | 2.05 | 1.00 | n/a | No Hit | |||
| CEBPA_HUMAN | -2.15 | 1.95 | 1.25 | n/a | No Hit | |||
| P66A_HUMAN | -2.84 | 2.74 | 1.00 | n/a | n/a |
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