rs2692771 chr10:7252311 C>T
- Sequence
gcagacaccaggcagtggctgccg[C/T]tgcttggaaatacagcagacagca
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ bone marrow cell-derived erythroid progenitors
- ASB for transcription factors
- PKNX1_HUMAN MTG16_HUMAN GABP1_HUMAN ERR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 3.33 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | n/a | 2.61 | 3.00 | n/a | n/a | |||
| GABP1_HUMAN | n/a | 4.21 | 2.00 | n/a | n/a | |||
| ERR1_HUMAN | n/a | 2.81 | 2.00 | n/a | No Hit | |||
| NCOA1_HUMAN | n/a | 4.42 | 2.00 | n/a | n/a |
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Motif analysis
