rs269286 chr1:52703346 A>G

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
USF2_HUMAN -0.94 3.36 1.001.2·10-4 1.25 n/a No Hit
GCR_HUMAN -0.00 1.63 1.001.5·10-4 1.00 n/a No Hit
ATF7_HUMAN -2.69 1.82 1.003.5·10-3 1.50 n/a No Hit
IKZF2_HUMAN -1.72 1.70 1.004.3·10-3 1.00 n/a n/a
HTF4_HUMAN -1.18 2.09 1.008.9·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol salmonella-induced pyroptosis waist hip ratio
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Minor_Salivary_Gland Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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