ADASTRA v6.1.0
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rs27008
chr5:56270773
G
>
T
Sequence
taaccctcagcctgcaaatcctgc[G/T]cacaggagaccagctggacctcct
ASB in cell types
CD14+ monocytes
WA09 (embryonic stem cells)
MCF7 (Invasive ductal breast carcinoma)
MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
n/a
3.50
1.00
8.3·10
-6
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
diastolic blood pressure (dbp)
,
systolic blood pressure (sbp)
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)