rs27046 chr5:66144136 G>C
- Sequence
gtgaaacgagcagcaacagcccca[G/C]ggacccgggagctggaggccgcag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- FOXK2_HUMAN CDN1B_HUMAN ANDR_HUMAN CEBPB_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.16 | n/a | 1.50 | n/a | No Hit | |||
| CDN1B_HUMAN | -0.12 | 1.41 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.34 | 0.40 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.46 | 0.35 | 2.00 | n/a | No Hit |
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