ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs27112
chr5:14449027
T
>
C
Sequence
caatatggcctagacattctcctc[T/C]agtcaagtcagtatttgtccagag
ASB in cell types
HEK293 (embryonic kidney)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.21
0.97
1.00
6.8·10
-5
2.82
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (geographic atrophy)
,
ldl cholesterol
,
triglycerides
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Ovary
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale