rs2728781 chr12:19439008 C>T
- Sequence
catgaagtaaaaagtttgaggacc[C/T]tgaaccaagatgtttgctctgggt
- ASB in cell types
- LHSAR (prostate epithelial cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.43 | 2.05 | 1.71 | n/a | No Hit | |||
| ANDR_HUMAN | -0.56 | 2.64 | 1.62 | n/a | No Hit |
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