rs2728953 chr3:22241304 C>T
- Sequence
gtcttcacaaataaaaccaaccta[C/T]agaggacagtgttcccttgcactc
- ASB in cell types
- SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.08 | 1.82 | 1.21 | -0.18 | Weak Discordant |
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Motif analysis
