rs2729140 chr3:1087112 A>G
- Sequence
caacaaggcaattatttaagagca[A/G]tagtcaataatattttcctgtagg
- ASB in cell types
- neural cell IPSC-derived bipolar neuron bipolar neuron neural progenitors
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.19 | 1.92 | 1.48 | n/a | No Hit | |||
| RAD21_HUMAN | 0.01 | 0.96 | 1.62 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP brain lesion distribution in multiple sclerosis, college completion, hdl cholesterol, microalbuminuria, partial epilepsy, refractive error, salmonella-induced pyroptosis, urinary albumin-to-creatinine ratio