rs273097 chr7:41385532 G>A
- Sequence
cagagagccaaggacctttttata[G/A]atgaagaaaacaagagctgaggtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TBX21_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 2.46 | -2.49 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.22 | -0.03 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, college completion, cystatin c in serum, hdl cholesterol, triglycerides, waist hip ratio