rs273158 chr7:41478447 T>C
- Sequence
cctatgaatcattttttcttttca[T/C]tttctatttctgaaatcaaagcaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN MEF2B_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -2.85 | 3.23 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.07 | 3.10 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | -2.66 | 2.57 | 1.00 | -1.25 | Weak Discordant | |||
| MTA2_HUMAN | -2.33 | 2.58 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | n/a | 2.08 | 1.00 | n/a | No Hit |
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Motif analysis
