rs2732289 chr8:33513544 C>T
- Sequence
tgtgtgagatgtgccacccttgaa[C/T]cttgttacgacgtgggcacattac
- ASB in cell types
- SNU-16 (Gastric adenocarcinoma) RH4 (alveolar rhabdomyosarcoma)
- ASB for transcription factors
- IKZF1_HUMAN HNF4A_HUMAN TYY1_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.40 | 1.47 | 1.00 | n/a | n/a | |||
| HNF4A_HUMAN | 2.66 | -1.87 | 2.00 | -2.31 | Concordant | |||
| TYY1_HUMAN | 2.24 | 0.17 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | -1.33 | 1.60 | 1.00 | n/a | No Hit |
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Motif analysis
