rs2732656 chr17:46269799 T>C
- Sequence
tgcttgtaaagcaataaatcttgc[T/C]ttgaaattagaccttggatgcacc
- ASB in cell types
- LNCaP (prostate carcinoma) LN95(Prostate adenocarcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HXB13_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.06 | -0.85 | 1.77 | n/a | No Hit | |||
| ANDR_HUMAN | 1.94 | -0.55 | 1.62 | n/a | No Hit | |||
| HXB13_HUMAN | 1.85 | -0.50 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, diastolic blood pressure (dbp), height, ldl cholesterol, lung function, forced expiratory volume in 1 second (fev1), systolic blood pressure (sbp)