rs2732704 chr17:46275748 T>C
- Sequence
taccattgtggtgaaaggtgcgtg[T/C]gtgtgtgtatgtgtgtgtttattt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN TLE3_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.93 | -0.83 | 2.00 | n/a | No Hit | |||
| TLE3_HUMAN | 2.29 | -1.05 | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 1.35 | 0.12 | 1.67 | -0.26 | Weak Concordant |
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Motif analysis
