rs2732821 chr2:102813237 C>T
- Sequence
tgagcccttcttcttttgtgttta[C/T]ttttcaagattctttatgaaattg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.95 | -0.23 | 1.96 | -1.86 | Weak Concordant | |||
| FOXA1_HUMAN | 1.53 | -0.34 | 2.00 | -2.44 | Concordant |
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Motif analysis
