rs2733357 chr17:5618665 C>A

Sequence
agcataatgcttttgagattcatt[C/A]atggtgtgcatacactgtgcatgt
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) LNCaP (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
TTC-1240 (Rhabdoid tumor of the kidney) -0.13 1.44 1.000.04 1.00
LNCaP (prostate carcinoma) 0.84 -0.22 0.051.00 1.41
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Motif analysis

No data available

Genetic associations

GRASP birth weight
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Nerve_Tibial,  Prostate,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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