rs2735118 chr7:38362895 A>G
- Sequence
caggtggcacagtaatagacccca[A/G]agtcattttcaattagatttcgca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN ZN217_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.28 | -0.77 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 2.34 | -0.77 | 1.00 | n/a | n/a | |||
| ZN217_HUMAN | 2.56 | n/a | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.49 | -2.03 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Whole_Blood