rs2735421 chr10:101781259 T>G

Sequence
aggcccagggccacgctgggtgct[T/G]ccacagtgccacctggcggtccct
ASB in cell types
WA09 (embryonic stem cells) neutrophils from periferal blood GM19099 (female B-cells Lymphoblastoid Cell Lines) A549 (lung carcinoma)
ASB for transcription factors
STAG1_HUMAN CDN1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.09 0.76 1.006.6·10-7 1.08 n/a n/a
CDN1B_HUMAN -0.01 1.23 0.960.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI educational attainment (years of education),  highest math class taken,  intelligence,  intelligence (mtag)
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia,  Heart_Left_Ventricle,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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