rs2738191 chr10:37976858 T>G
- Sequence
cacgtctgggcttgaagacagaaa[T/G]ccaccgtgaggtgctccaaggaac
- ASB in cell types
- CD14+ monocytes MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- STAT1_HUMAN CTCF_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 3.39 | 2.00 | 1.99 | Weak Concordant | |||
| CTCF_HUMAN | 0.45 | 0.60 | 1.38 | 0.96 | Weak Concordant | |||
| RBBP5_HUMAN | n/a | 2.62 | 2.00 | n/a | n/a |
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Motif analysis
