rs2739476 chr19:50870562 A>G
- Sequence
atccactcatcattcagcatctgc[A/G]ctatgcgggcgaggccggcgccat
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.84 | 1.83 | 1.46 | n/a | No Hit |
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