rs2741246 chr2:232439835 T>C
- Sequence
ggcgaatactgaactcggtgcaac[T/C]ctggctgctggcagctgggcttgg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.56 | -0.39 | 1.83 | n/a | No Hit | |||
| STAG1_HUMAN | 1.62 | -0.65 | 1.50 | n/a | n/a |
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