rs2742920 chr6:167735135 C>T
- Sequence
tccgccgctgacttcccctgctga[C/T]ctctgccactgacctccccctctg
- ASB in cell types
- liver
- ASB for transcription factors
- RXRA_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 2.76 | 0.24 | 1.50 | -1.89 | Weak Concordant | |||
| HNF4A_HUMAN | 2.30 | -4.25 | 1.50 | -1.89 | Weak Concordant |
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Motif analysis
