rs2742976 chr1:23531510 T>G
- Sequence
ggagacagagggtggttccgggat[T/G]cacagtgcagaggcggccagagca
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) foreskin keratinocyte CD14+ monocytes
- ASB for transcription factors
- RAD21_HUMAN BCOR_HUMAN CDN1B_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.81 | 0.02 | 1.10 | n/a | n/a | |||
| BCOR_HUMAN | -1.99 | 2.34 | 1.00 | n/a | n/a | |||
| CDN1B_HUMAN | 0.07 | 1.31 | 1.17 | n/a | n/a | |||
| STAT1_HUMAN | -1.14 | 1.99 | 2.00 | 1.06 | Weak Concordant |
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Motif analysis
