rs2743327 chr20:45311472 C>G

Sequence
gtttacagtcgtgaaaaagcgttg[C/G]ggggagcgggaggaggaaacgaag
ASB for transcription factors
ZN529_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN529_HUMAN n/a 3.12 1.000.01 2.00 3.36 Concordant
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Motif analysis

ZN529_HUMAN Concordant
ZN529_HUMAN pic

Genetic associations

GRASP hdl cholesterol,  rheumatoid arthritis
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Esophagus_Mucosa,  Minor_Salivary_Gland,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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