rs2743330 chr20:45291064 C>A

Sequence
gacccagctccaaatcagtgctcc[C/A]ggcgccatccagtggccattaggg
ASB in cell types
K562 (myelogenous leukemia) neutrophils from periferal blood lower leg skin
ASB for transcription factors
RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 2.42 1.12 1.001.6·10-3 1.47 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  rheumatoid arthritis
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Hippocampus,  Brain_Nucleus_accumbens_basal_ganglia,  Esophagus_Mucosa,  Minor_Salivary_Gland,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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