rs2743334 chr20:45291105 A>G

Sequence
cattagggagattgcaagagaaaa[A/G]agcatgagaaaagaaaccccagag
ASB in cell types
K562 (myelogenous leukemia) neutrophils from periferal blood

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) -0.02 0.96 1.001.1·10-6 1.99
neutrophils from periferal blood 2.21 0.30 5.0·10-51.00 1.50
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Motif analysis

No data available

Genetic associations

EMBL-EBI blood protein levels
GRASP 2 hour glucose,  rheumatoid arthritis
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Nucleus_accumbens_basal_ganglia,  Esophagus_Mucosa,  Minor_Salivary_Gland,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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