rs2746259 chr20:62824709 G>A
- Sequence
gccaggctgggactggccataggc[G/A]tcagagactgcgggggagagctag
- ASB in cell types
- primary B-CLL cells
- ASB for transcription factors
- BRD4_HUMAN MBD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | -0.39 | 3.08 | 3.00 | n/a | n/a | |||
| MBD4_HUMAN | -0.17 | 1.44 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Nerve_Tibial, Pancreas, Pituitary, Stomach, Thyroid, Whole_Blood