rs2746621 chr20:23023983 A>G
- Sequence
gcacgccaacagacaacaggaggc[A/G]gtgtggagcaatatgctgttctaa
- ASB in cell types
- neutrophils from periferal blood GM23338
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.18 | 0.20 | 1.18 | 1.02 | Weak Discordant | |||
| RAD21_HUMAN | 1.11 | -0.51 | 1.42 | n/a | n/a |
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Motif analysis
