rs2747544 chr20:33731833 G>T
- Sequence
cacactcggtggcccggtgactgg[G/T]ttatcgagtggagccagggcagcc
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.42 | n/a | 1.33 | n/a | No Hit | |||
| BRD4_HUMAN | 2.78 | -1.89 | 1.00 | n/a | n/a |
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