rs2748389 chr10:132345430 A>C
- Sequence
gccttgcacttttgacccagatgg[A/C]ctctatttggaaattgttttaaat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SMAD4_HUMAN SKI_HUMAN RARA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD4_HUMAN | n/a | 2.88 | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | -3.95 | 2.23 | 1.50 | n/a | n/a | |||
| RARA_HUMAN | -2.51 | 1.56 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Thyroid, Whole_Blood