rs2748425 chr17:78128765 G>C
- Sequence
gccagtcgcaggtctgccggggcc[G/C]ggggagtagccgcacctcccggcc
- ASB in cell types
- T47D (invasive ductal carcinoma) GM12890 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.35 | 1.82 | 1.08 | n/a | No Hit | |||
| STAG1_HUMAN | -0.59 | 1.31 | 1.06 | n/a | n/a |
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