rs2748993 chr6:52731940 C>A

Sequence
agggccagctttttccgcaggcta[C/A]gtgaatgacatgcctggtcaaagc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) iPS-derived dermal fibroblasts
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN 2.82 n/a 2.0·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse,  Esophagus_Mucosa,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Stomach

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