rs2749792 chr20:55579209 G>A
- Sequence
caaaaaatttgtacttggccaaag[G/A]gaaatcaatcctgtgttctgaata
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | n/a | 2.02 | 6.00 |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), hdl cholesterol, obesity with early age of onset (age >2), refractive error