rs2753433 chr1:236084228 T>G
- Sequence
ccattccttatgcaggaacaaagg[T/G]atgaggataaacaaaatgtaaacc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN SOX13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 3.11 | -4.65 | 1.33 | n/a | No Hit | |||
| SOX13_HUMAN | 2.23 | -3.91 | 1.50 | 2.36 | Discordant |
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Motif analysis
