rs2754775 chr6:24774953 G>T
- Sequence
tcgtctgcgtcagttggtcacgtg[G/T]ttgttcggagcgggcgagcggagt
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- NRF1_HUMAN ANDR_HUMAN GCR_HUMAN TYY1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 0.15 | 1.51 | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.48 | -4.57 | 1.83 | n/a | No Hit | |||
| GCR_HUMAN | 1.33 | 0.99 | 1.33 | n/a | No Hit | |||
| TYY1_HUMAN | 1.79 | n/a | 4.00 | n/a | No Hit | |||
| RFOX2_HUMAN | 1.55 | 0.56 | 3.00 | n/a | n/a |
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